Phylogenetic analysis

Phylogenetic analysis

Examples

Input

Fasta File:

Number of most similar blast result to include:

1 2 3 4 5 6

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This feature is disabled for the demo version.

We have already added sequences for you.

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A crude check using blastn

NOTE: PhyloPi has been tested only on the pol region of the HIV genome.
Typical genotyping targets for clinical purposes include the protease,
reverse transcriptase and integrase regions of the genome, either as
separate or continuous sequences. Phylogenetics can only be conducted
on areas which overlap. For example, if your facility uses separate
assays to genotype the PR_RT area and the INT area you will need to submit
these sequences as separate analyses.